lifesciences
14.6 KB
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"><!-- Generated from data/head.php, ../../smarty/{head.tpl} --><head><meta http-equiv="Content-Type" content="text/html; charset=utf-8" /><title>Health Care and Life Sciences (Semantic Web) Current Status - W3C</title><link rel="stylesheet" href="/2008/site/css/minimum" type="text/css" media="handheld, all" /><style type="text/css" media="print, screen and (min-width: 481px)" xml:space="preserve">
@import url("/2008/site/css/advanced");
</style><link href="/2008/site/css/minimum" rel="stylesheet" type="text/css" media="handheld, only screen and (max-device-width: 480px)" /><meta name="viewport" content="width=device-width" /><link rel="stylesheet" href="/2008/site/css/print" type="text/css" media="print" /><link rel="shortcut icon" href="/2008/site/images/favicon.ico" type="image/x-icon" /></head><body id="www-w3-org" class="w3c_public"><div id="w3c_container">
<!-- Generated from data/mast.php, ../../smarty/{mast.tpl} -->
<div id="w3c_mast">
<!-- #w3c_mast / Page top header -->
<h1 class="logo">
<a tabindex="2" accesskey="1" href="/"><img src="/2008/site/images/logo-w3c-mobile-lg" width="90" height="53" alt="W3C" /></a>
<span class="alt-logo">W3C</span>
</h1>
<div id="w3c_nav">
<!-- Search form and media selection -->
<form action="/Help/search" method="get" enctype="application/x-www-form-urlencoded"><div class="w3c_sec_nav"><!-- --></div><ul class="main_nav"><li class="first-item">
<a href="/standards/">Standards</a>
</li><li>
<a href="/participate/">Participate</a>
</li><li>
<a href="/Consortium/membership">Membership</a>
</li><li class="last-item">
<a href="/Consortium/">About W3C</a>
</li><li class="search-item">
<div id="search-form">
<input tabindex="3" class="text" name="q" value="" title="Search" type="text" />
<button id="search-submit" name="search-submit" type="submit"><img class="submit" src="/2008/site/images/search-button" alt="Search" width="21" height="17" /></button>
</div>
</li></ul></form>
</div>
<!-- /end #w3c_nav -->
</div>
<!-- /end #w3c_mast -->
<div id="w3c_main">
<!-- Generated from data/crumbs.php, ../../smarty/{crumbs.tpl} -->
<div id="w3c_logo_shadow" class="w3c_leftCol">
<img height="32" alt="" src="/2008/site/images/logo-shadow" />
</div>
<div class="w3c_leftCol"><h2 class="offscreen">Site Navigation</h2>
<br /></div>
<div class="w3c_mainCol">
<div id="w3c_crumbs">
<div id="w3c_crumbs_frame">
<ul class="bct"> <!-- .bct / Breadcrumbs -->
<li class="skip"><a tabindex="1" accesskey="2" title="Skip to content (e.g., when browsing via audio)" href="#w3c_content_body">Skip</a></li>
<li><a href="/">W3C</a> <span class="cr">»</span> </li>
<li><a href="/standards/">Standards</a> <span class="cr">»</span> </li>
<li><a href="/TR/">All Standards and Drafts</a> <span class="cr">»</span> </li>
<li class="current">Health Care and Life Sciences (Semantic Web) Current Status</li>
</ul>
</div>
</div>
<h1 class="title">Health Care and Life Sciences (Semantic Web) Current Status</h1>
<ul class="w3c_toc">
<li>
<a href="#completed">completed work</a>
</li>
</ul>
<div id="w3c_content_body">
<div id="w3c_generated_status">
<p id="w3c_toggle_include" class="default_open intro tPadding">This page summarizes the relationships among specifications, whether they are finished standards or drafts. Below, each title
links to the most recent version of a document.
For related introductory information, see: <a href="http://www.w3.org/standards/semanticweb/applications">Vertical Applications</a>.</p>
<h2 id="completed">Completed Work</h2>
<p>
<a href="/TR/tr-technology-stds">W3C Recommendations</a> have
been reviewed by W3C Members, by software developers, and by other
W3C groups and interested parties, and are endorsed by the
Director as Web Standards. Learn more about the <a href="/Consortium/Process/tr#rec-advance">W3C Recommendation
Track</a>.</p>
<p>
<a href="/2005/10/Process-20051014/tr.html#q75">Group Notes</a> are <em>not</em> standards and do not
have the same level of W3C endorsement.</p>
<h3 id="notes">Group Notes</h3>
<div class="data lMargin rMargin">
<table class="w3c_spec_summary_table">
<tbody>
<tr>
<td class="table_datecol">
<a href="../history/hcls-orb" title="Ontology of Rhetorical Blocks (ORB) publication history">2011-10-20</a>
</td>
<td>
<h4 class="w3c_status_title">
<a title="status is NOTE" href="http://www.w3.org/TR/2011/NOTE-hcls-orb-20111020/">Ontology of Rhetorical Blocks (ORB)</a>
</h4>
<div class="expand_description">
<p>The Ontology of Rhetorical Blocks is a formalization capturing the coarse-grained rhetorical structure of scientific publications. This note is designed to provide a general overview of the motivation and use-cases supporting ORB, in addition to the actual conceptual elements, as well as, practical examples of how to use it in conjunction with different representation languages.</p>
</div>
</td>
</tr>
<tr>
<td>
<a href="../history/hcls-swan" title="Semantic Web Applications in Neuromedicine (SWAN) Ontology publication history">2009-10-20</a>
</td>
<td>
<h4 class="w3c_status_title">
<a title="status is NOTE" href="http://www.w3.org/TR/2009/NOTE-hcls-swan-20091020/">Semantic Web Applications in Neuromedicine (SWAN) Ontology</a>
</h4>
<div class="expand_description">
<p>This is a sample short description for this specification;
over time we will replace this description with a real one.</p>
</div>
</td>
</tr>
<tr>
<td>
<a href="../history/hcls-sioc" title="SIOC, SIOC Types and Health Care and Life Sciences publication history">2009-10-20</a>
</td>
<td>
<h4 class="w3c_status_title">
<a title="status is NOTE" href="http://www.w3.org/TR/2009/NOTE-hcls-sioc-20091020/">SIOC, SIOC Types and Health Care and Life Sciences</a>
</h4>
<div class="expand_description">
<p>This is a sample short description for this specification;
over time we will replace this description with a real one.</p>
</div>
</td>
</tr>
<tr>
<td>
<a href="../history/hcls-swansioc" title="SWAN/SIOC: Alignment Between the SWAN and SIOC Ontologies publication history">2009-10-20</a>
</td>
<td>
<h4 class="w3c_status_title">
<a title="status is NOTE" href="http://www.w3.org/TR/2009/NOTE-hcls-swansioc-20091020/">SWAN/SIOC: Alignment Between the SWAN and SIOC Ontologies</a>
</h4>
<div class="expand_description">
<p>This is a sample short description for this specification;
over time we will replace this description with a real one.</p>
</div>
</td>
</tr>
<tr>
<td>
<a href="../history/hcls-senselab" title="Experiences with the conversion of SenseLab databases to RDF/OWL publication history">2008-06-04</a>
</td>
<td>
<h4 class="w3c_status_title">
<a title="status is NOTE" href="http://www.w3.org/TR/2008/NOTE-hcls-senselab-20080604/">Experiences with the conversion of SenseLab databases to RDF/OWL</a>
</h4>
<div class="expand_description">
<p>One of the challenges facing Semantic Web for Health Care and Life
Sciences is that of converting relational databases into Semantic Web format.
The issues and the steps involved in such a conversion have not been well
documented. To this end, we have created this document to describe the
process of converting SenseLab databases into OWL. SenseLab is a collection
of relational (Oracle) databases for neuroscientific research. The conversion
of these databases into RDF/OWL format is an important step towards realizing
the benefits of Semantic Web in integrative neuroscience research. This
document describes how we represented some of the SenseLab databases in
Resource Description Framework (RDF) and Web Ontology Language (OWL), and
discusses the advantages and disadvantages of these representations. Our OWL
representation is based on the reuse and extension of existing standard OWL
ontologies developed in the biomedical ontology communities. The purpose of
this document is to share our implementation experience with the
community.</p>
</div>
</td>
</tr>
<tr class="lastRow">
<td>
<a href="../history/hcls-kb" title="A Prototype Knowledge Base for the Life Sciences publication history">2008-06-04</a>
</td>
<td>
<h4 class="w3c_status_title">
<a title="status is NOTE" href="http://www.w3.org/TR/2008/NOTE-hcls-kb-20080604/">A Prototype Knowledge Base for the Life Sciences</a>
</h4>
<div class="expand_description">
<p>The prototype we describe is a biomedical knowledge base, constructed for a demonstration at Banff WWW2007 , that integrates 15 distinct data sources using currently available Semantic Web technologies such as the W3C standard Web Ontology Language [OWL] and Resource Description Framework [RDF]. This report outlines which resources were integrated, how the knowledge base was constructed using free and open source triple store technology, how it can be queried using the W3C Recommended RDF query language SPARQL [SPARQL], and what resources and inferences are involved in answering complex queries. While the utility of the knowledge base is illustrated by identifying a set of genes involved in Alzheimer's Disease, the approach described here can be applied to any use case that integrates data from multiple domains.</p>
</div>
</td>
</tr>
</tbody>
</table>
</div>
</div>
</div>
</div>
</div>
</div><!-- Generated from data/footer.php, ../../smarty/{footer-block.tpl} --><div id="w3c_footer">
<div id="w3c_footer-inner">
<h2 class="offscreen">Footer Navigation</h2>
<div class="w3c_footer-nav">
<h3>Navigation</h3>
<ul class="footer_top_nav"><li>
<a href="/">Home</a>
</li><li>
<a href="/standards/">Standards</a>
</li><li>
<a href="/participate/">Participate</a>
</li><li>
<a href="/Consortium/membership">Membership</a>
</li><li class="last-item">
<a href="/Consortium/">About W3C</a>
</li></ul>
</div>
<div class="w3c_footer-nav">
<h3>Contact W3C</h3>
<ul class="footer_bottom_nav"><li>
<a href="/Consortium/contact">Contact</a>
</li><li>
<a accesskey="0" href="/Help/">Help and FAQ</a>
</li><li>
<a href="/Consortium/sponsor/">Sponsor / Donate</a>
</li><li>
<a href="/Consortium/siteindex">Site Map</a>
</li><li>
<address id="w3c_signature">
<a href="mailto:site-comments@w3.org">Feedback</a> (<a href="http://lists.w3.org/Archives/Public/site-comments/">archive</a>)</address>
</li></ul>
</div>
<div class="w3c_footer-nav">
<h3>W3C Updates</h3>
<ul class="footer_follow_nav"><li>
<a href="http://twitter.com/W3C" title="Follow W3C on Twitter">
<img src="/2008/site/images/twitter-bird" alt="Twitter" width="78" height="83" class="social-icon" />
</a>
<a href="http://identi.ca/w3c" title="See W3C on Identica">
<img src="/2008/site/images/identica-logo" alt="Identica" width="91" height="83" class="social-icon" />
</a>
</li></ul>
</div>
<p class="copyright">Copyright © 2012 W3C <sup>®</sup> (<a href="http://www.csail.mit.edu/">
<acronym title="Massachusetts Institute of Technology">MIT</acronym>
</a>, <a href="http://www.ercim.eu/">
<acronym title="European Research Consortium for Informatics and Mathematics"> ERCIM</acronym>
</a>, <a href="http://www.keio.ac.jp/">Keio</a>) <a href="/Consortium/Legal/ipr-notice">Usage policies apply</a>.</p>
</div>
</div><!-- /end #footer --><!-- Generated from data/scripts.php, ../../smarty/{scripts.tpl} --><!-- At the bottom for performance reasons --><!-- Generated from data/scripts.php, ../../smarty/{scripts.tpl} --><!-- At the bottom for performance reasons --><div id="w3c_scripts">
<script type="text/javascript" src="/2008/site/js/main" xml:space="preserve"><!-- --></script>
</div></body></html>